CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_111000019
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_111000019
T139123_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_111000019
C2H2 ZF
50
72
YRCEECSRPFSRLDNLKTHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
78
100
YRCEECSKQFSTLGNLQAHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
106
128
YWCEECSRQFSQLVTLKRHMGTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
134
156
YRCEKCSKQFSELGHLKKHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
162
184
YRCEECCRQFSELGSLKKHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
190
212
YRCEECSRQFSELGNLKTHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
285
307
YRCEECSKQFSQLCSLKGHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
313
335
YRCEECSKQFSHLSDLKRHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
341
363
FRCEECSRQFNRPDNLKRHMQTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
369
391
YRCEKCSRQFSELVNLKKHLRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
397
419
YQCDECSRQFSQLGDLKGHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
425
447
FRCEECSSQFSRLGNLKSHMHTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
453
475
YRCEECSRQFSRLGDLKRHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
481
503
YRCEECSRQFSELGNLKSHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
509
531
YRCEECSRQFSDLGHLKSHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
537
559
YRCEECSRQFSELGNLKNHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
565
579
YRCEECSKQFSGWSS
fgenesh2_pg.scaffold_111000019
C2H2 ZF
599
621
YRCEECSRQFSVPGSLKLHMRTH
fgenesh2_pg.scaffold_111000019
C2H2 ZF
627
649
YRCEECSRQFTQLSNLMVHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found