CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_112000059
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_112000059
T139132_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_112000059
C2H2 ZF
38
60
YKCEECSRQFSRLDDLKKHIRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
66
88
YRCEECSRQFSRLDDLKKHIRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
94
116
FRCEGCSKQFSQLGDLKKHMRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
122
144
YKCEECSRQFSTSGNLKKHMRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
150
172
YKCEECSRQFSDLGKLKTHMRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
178
200
YKCEECSRQFSRLDDLKKHIRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
206
228
YRCEECSRQFSRLDDLKKHIRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
249
271
YKCEECSRQFSQSGDLKKHMRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
277
299
YKCEQCSRQFSELGSLKTHIRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
305
327
YRCEECSRQFSIFGNLKRHMQTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
333
355
YMCEECSKQFNTSGSLERHMRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
380
402
YRCEECSKQFSVLCNLKRHMQTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
408
430
YMCGECSRQFSQLSHLKTHMRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
436
458
YKCEECSRQFSQLCHLKTHMRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
464
486
YKCEECSRQFSRLGDLKKHMHTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
492
514
YRCEECSRQFSQLGNLKKHMLTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
520
542
YRCEECSRQFSDHGKLKTHMRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
548
570
YRCEKCSRQFCQLGDLKKHIRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
576
598
YRCEECSRHFSQLDELKTHMRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
604
626
YKCEKCSKQFSTSSHLKRHMRTH
fgenesh2_pg.scaffold_112000059
C2H2 ZF
632
654
YKCGECSRQFSASRNLKKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found