CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_114000093
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_114000093
T139139_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_114000093
C2H2 ZF
10
32
YSCDRCDKSFVSISHRNVHMQSH
fgenesh2_pg.scaffold_114000093
C2H2 ZF
38
60
YMCEVCNKRFKSLSHLKSHVKTH
fgenesh2_pg.scaffold_114000093
C2H2 ZF
66
88
HLCKNCNKSFNQVGHLKKHMRTH
fgenesh2_pg.scaffold_114000093
C2H2 ZF
105
127
YKCEKCNGQFSQLSNLKVHMRTH
fgenesh2_pg.scaffold_114000093
C2H2 ZF
133
155
YRCEECSRQFSRLSNLKEHRLTH
fgenesh2_pg.scaffold_114000093
C2H2 ZF
189
211
YMCGECGYRATQKCDLSRHMKKH
fgenesh2_pg.scaffold_114000093
C2H2 ZF
217
239
YKCDQCDYSAAQKSSLDIHLLKH
fgenesh2_pg.scaffold_114000093
C2H2 ZF
245
267
YMCWECGYRATQKGDLSRHMKKH
fgenesh2_pg.scaffold_114000093
C2H2 ZF
273
295
YKCDQCDYSAAQKSTLDSHLATH
fgenesh2_pg.scaffold_114000093
C2H2 ZF
302
324
IMCGECGYRTADRRNLHRHMRTH
fgenesh2_pg.scaffold_114000093
C2H2 ZF
330
352
YKCDQCDYSAAQKSTLNHHLSKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found