CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_119000032
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_119000032
T139142_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_119000032
C2H2 ZF
16
37
KCEECSKQFSSRSHLKIHMRTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
43
65
YRCEECSRQFSQLSALKTHMRTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
71
93
YKCEECSKQFRRLSHLESHMLTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
99
118
QECSRQFSVLCNLKTHMRTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
124
146
YGCEECSRQFSDPGALKSHMRTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
152
174
YRCEECSKGFSMPCHLKTHMQTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
180
202
YKCEECSRQFGQMVHLKTHMQTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
208
230
YKCEECSRQFSQMCHLKSHMRTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
236
258
YRCEECSKQCSTLSNLKTHMRTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
264
286
FRCEECSGQFCTIGQLKTHMRTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
292
314
YRCEECSKQCSTLGNLKTHKRTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
320
342
YKCEECSKQCSTLGSLKTHMRTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
348
370
YRCEECSKQCSALGNLKSHMRTH
fgenesh2_pg.scaffold_119000032
C2H2 ZF
376
398
YNCEVCNRQFSHLCHLKKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found