CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_126000058
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_126000058
T139149_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_126000058
C2H2 ZF
12
34
YECDTCGHRAFTSAALSKHQKIH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
40
62
YKCDQCEYSTVLRANLAQHMIKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
68
90
YMCSECGFCTAYQSNLSAHMKRH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
124
146
YECDTCGHRAFTSADLSKHLKIH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
152
174
YKCDQCEYTTVLRASLAEHMLKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
180
202
YMCSECGFCTAYQSNMSAHMKRH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
208
230
HKCNQCDYAALKKGNLKAHMLKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
236
258
YRCQKCEYRTAVKSSLTKHLRIH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
264
286
YKCHQCNYATIGSFQLKEHLRKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
292
314
YMCGECGYRTNFRSSLTIHIKIH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
320
342
LKCNLCDYTALRKHSLVMHMTKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
348
370
YECDTCGHRAFTLAALSHHLKTH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
376
398
YKCNQCEYSTVLSANLAQHMIKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
404
426
YMCSECGFRTAYQSNLSAHMKRH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
432
454
HKCNQCDYAALKKANLKAHMLKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
460
482
WKCEVCGLNMSTRTALLQHLKKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
556
578
YRCDQCEYAAVYKSRFDKHMLSH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
583
605
HKCNQCDFAAVQKAHLDLHMAKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
611
633
YSCEVCGYRASSRQHVSQHVKIH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
667
689
YMCGQCDFRTKFRSNLTTHMKRH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
695
717
HKCNQCDFAAVQKAHLDLHMAKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
723
745
YSCEVCGYRAYSRQHVSQHVKIH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
751
773
HKCDQCEYAAVCKSNLRSHMLKH
fgenesh2_pg.scaffold_126000058
C2H2 ZF
779
801
YMCGECGYRTNFRSNLATHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found