CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_126000068
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_126000068
T139150_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_126000068
C2H2 ZF
27
49
YRCQKCEYRTDVKSSLTKHLRIH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
55
77
YKCHQCSYATIGSFQLKEHLRKH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
86
105
GECGYRTDFRSSLTIHIKSH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
139
161
YKCETCGHRAFTLAALSKHLKIH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
167
189
YKCNQCEYTTAFRANLAVHMLKH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
195
217
YMCGECDFRTAFKTNLSAHVKIH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
251
273
YKCETCGHRAFTSAALTKHLKIH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
279
301
YKCHQCEYSTVFRANLAVHMLKH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
307
329
YMCGECDFRTAFKTNLSAHVKRH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
363
385
YKCETCGHRAFTSAALTKHLKIH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
391
413
YKCHQCEYSTVLSANLAQHMIKH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
419
441
YMCGECGFRTAYQSNLSVHMKRH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
447
469
HKCNQCDYAALKKANLKAHMLKH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
475
497
WNCEVCGLNMSTRTALLQHVKKH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
546
568
YMCRECDFSTASRANLSAHMKIH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
574
596
HKCNLCDYAALRKGSLVMHMTKH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
617
639
YMCGHCDFRTKFKSNLSTHMKRH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
645
667
HKCNQCDFAAVQKAHLDLHMAKH
fgenesh2_pg.scaffold_126000068
C2H2 ZF
686
708
YMCGECGYRTNFRSNLATHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found