CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_13000006
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_13000006
T139154_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_13000006
C2H2 ZF
10
33
YQCGHCDYSTVAKNRLAEHITATH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
39
61
HKCNLCDYSAARKSNLHRHLATH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
67
89
YKCDVCDFATLHKSYLKDHLASH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
95
117
HRCEVCDFATAHKSSLADHMAIH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
123
145
YKCKSCDFSTARKSSLMRHLAVH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
151
173
YKCDICGHATLRLSTWKLHMSTH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
179
201
YKCDVCDYSSAKMSNLKLHLATH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
207
229
FKCEVCEYSTSRKSSLKSHMATH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
235
257
FKCDSCGYSASLMSTLKRHMATH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
263
285
YKCEACGYSTTKMSNLKQHMTCH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
291
313
YKCEVCGFATAQKSNLKRHMATH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
319
341
YRCDICGYSAAQIATLKQHINAH
fgenesh2_pg.scaffold_13000006
C2H2 ZF
347
369
YRCYACDFATAHPSSLKKHMANH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found