CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_1323000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_1323000001
T139160_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
25
47
YKCDECSKQFSVLGNLKIHMRTH
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
53
67
YRCDECSKQFNVRSG
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
68
84
GRQFSRLGKLKSHVMTH
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
90
104
YQCKECSRSFRTSEE
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
110
132
HKCGECDKEFRQLSDMKRHMRTH
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
138
160
FRCEDCCKQFSVLSNMRRHMKTH
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
166
188
YKCEECGKQFSQLGNLRSHMRTH
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
194
216
YKCEECSKQFSELCSLKRHMHTH
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
222
244
YRCEKCGKQFSQLDNLKSHIRTH
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
250
272
YRCDECSKQFRDLSSLKSHMWTH
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
278
300
YKCEECSKQFSNLAHLKSHMRTH
fgenesh2_pg.scaffold_1323000001
C2H2 ZF
306
328
YKCEECSKQFSDRSNLKRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found