CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_144000092
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_144000092
T139181_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_144000092
C2H2 ZF
1
22
MCRECGYRTTTKARLSRHLRIH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
28
50
YKCDQCDYSAAQKSTLDQHRTKH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
56
78
YMCGECGYRSAQMSTLYQHIRTH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
84
106
YKCDLCDYSAASKSNLNKHLAKH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
112
134
YMCGECGFRTAQTSHLSAHMRIH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
188
211
FKCDQCNYATSHKPNLDRHIAAKH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
217
240
FKCDQCDYSATQKYHLGNHIATKH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
246
268
YMCGECGYRTVEKSKLSRHMRAH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
302
324
YMCGECGFRTALKSTLSTHMKIH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
329
345
PHKTVQKSKLSRHMRTH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
351
373
YKCDQCDYSAARKSVLDQHRTKH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
379
401
YMCGECGYRAAQKSDLSRHMRTH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
407
429
YKCKQCDYSAAEKSSLNKHLAKH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
435
457
YMCGECGYRTAQRSTLSKHMRTH
fgenesh2_pg.scaffold_144000092
C2H2 ZF
487
510
FKCDQCNYATSHKPNLDRHIATKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found