CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_144000096
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_144000096
T139184_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_144000096
C2H2 ZF
55
77
FMCGECGYRAADRSNLSRHMRTH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
83
105
YKCGECGFRAVQWSKLSRHMRTH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
111
134
YKCDQCDYSAIRKYRLDNHIATKH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
140
162
YMCGECGYRTVEKSTLSVHMRTH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
168
190
YKCDQCDYSAAQRINLVTHQATH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
196
218
YMCGECGYRAAQRSALSLHMRTH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
224
247
YKCDHCDYSAAQKGTLDKHVAAAH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
253
275
YICGECGYRTARKSDFSQHMTNH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
281
303
CKCDLCDFSTVSKSNLNHHLATH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
309
331
YMCGECGFRTGSIHDLSQHMRTH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
365
387
YICEECGYRTAKKSHLSRHIKTH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
393
415
FKCGECDYSAADKYTLDKHLAKH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
421
444
YKCDQCDFSAIQKSHINYHIATKH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
450
472
YMCGECGYRTVEKSTLSVHLRTH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
478
500
YKCDQCDYSAAQKQNLDQHRRKH
fgenesh2_pg.scaffold_144000096
C2H2 ZF
506
528
FMCGECGYRAAQKADLSKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found