CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_144000097
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_144000097
T139185_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_144000097
C2H2 ZF
55
77
YMCNVCGYGTAKRPEFSKHMKIH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
88
110
YMCGECGYKTAESSHLFRHMRTH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
116
138
YKCDQCDYSAAQKSNLGNHLLTH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
144
167
FKCDQCDYSAAQKRTLNIHTAAKH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
173
195
YICGECGFRTTQRSSLSQHMRRH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
201
224
FKCVQCDYSAVQKANLDYHIAAKH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
230
252
YKCDQCDYFAAKKAHLYNHLLTH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
258
280
FKCDQCDFSAAQKINLVTHQTTH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
286
308
YMCGECGYRAAQRSNLSQHMRRH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
314
337
FKCDQCDYYAAQKTNLDYHIASKH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
343
365
YMCGECGYRTARKANLSNHMRSH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
371
393
YKCDQCDYSTAWKSSLNQHLVIH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
399
421
YMCGECGYRTAFKSNLSQHMRTH
fgenesh2_pg.scaffold_144000097
C2H2 ZF
455
477
YMCGECEYRTVQKSDLSQHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found