CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_144000106
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_144000106
T139190_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_144000106
C2H2 ZF
54
76
YNCDHCDYSTPWKSTFDRHIASH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
82
104
YMCGECGYRASTSSTLSQHMRTH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
167
189
YKCDQCDYSATHKSSLDRHQRKH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
195
218
YKCDQCDYSAAQKPHLDKHIAAIH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
224
246
YMCGECGFRTTETSKLSIHMRTH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
252
274
YKCGQCDYSAAVKCNLDTHRATH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
280
302
YMCGECGYRAAQRSTLSKHMRTH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
308
331
FKCDQCDYSATQKGSLDQHIAAKH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
337
359
YMCGECGYRTARKSNLYKHMRTH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
365
388
HKCDQCDYSAAQKSHLDYHMAVKH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
394
416
YMCGECGYRTAQKSKLSRHMRIH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
422
445
YKCDHCDYAAAHKSTLDNHMVAKH
fgenesh2_pg.scaffold_144000106
C2H2 ZF
451
473
YMCEECGYGTAHKSHLSRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found