CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_144000107
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_144000107
T139191_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_144000107
C2H2 ZF
83
105
YVCGECGYSTARKFALARHMRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
111
133
YKCDLCDFAAAERGNLVTHQATH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
139
161
YMCEKCGYRTTQKSALSSHMRSH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
167
190
YKCDQCDYSASQKSYLEHHMAAKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
196
218
YMCDECVFKTARKSDLTRHMRAH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
224
246
YKCDQCDYSAARKSYLHKHRMKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
252
274
YMCGECGYRTAHHSYLSKHMTTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
280
303
YKCDQCEYSAALKANLDNHIAAKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
309
331
YMCGECRYRSVQKSKLSRHMRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
337
360
YKCDQCDYSAAQKGTLDIHMAAKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
366
388
YMCGECGFRTTQRPNLSRHMRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
394
417
YKCDQCDYSTAAKGNLPRHVGTKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
423
445
YMCEDCGYRTAHRANLSIHMRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
451
474
YRCDQCDYSAAQKPHLDHHMAAKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
480
502
YMCGECGYRTARRSNLSQHMRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
633
655
YICGECGYRTTRKSDLSRHKRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
661
683
FMCNQCDYSAAQKSHLDEHRINH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
689
711
YMCGECGFKTARKSDLSRHIRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
717
739
FKCNQCDYSAARKSHLDEHRIKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
745
767
YMCGECGNRTTHQSYLSKHMKTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
773
796
YKCDQCDYSAALKSNLDNHIAAKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
802
824
YMCGECGYRAVQKSKLSIHMRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
830
853
YKCDQCDYSAAQASTLVSHLAAKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
859
882
YKCEQCDYSASVKRNLEHHIAAKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
888
910
YMCGECGYRTVLKSKLSRHMRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
916
939
YKCDQCDYSAAQKNNLDNHIAAKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
945
968
YTCEECDYSAAQKATLNNHIATKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
974
996
YMCGECGYRTAQKSTLYQHIRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
1002
1024
YKCDQCDFSAAVKVNLVTHQTTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
1030
1052
YMCGECGYRAAQRSTLSKHMRTH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
1058
1081
YKCDKCEYSTAQKVNLDNHIAAKH
fgenesh2_pg.scaffold_144000107
C2H2 ZF
1087
1109
YMCRECGFRTARKSNLSKHMETH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found