CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_144000110
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_144000110
T139193_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_144000110
C2H2 ZF
109
131
FMCGECGYRAVQKSKVSRHMRTH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
137
159
YKCDQCDYSAARKAHLDQHRTRH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
165
187
YMCGECGYRTATKSILAKHMKMH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
193
216
FKCDQCNYATTHKPNLVRHIAAKH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
222
245
FKCDQCDYSATQKYHLDNHIATKH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
251
273
YMCGECGYRTVEKSKLSRHMRAH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
307
329
YMCGECGFRTALKSTLSTHVKIH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
364
386
YMCGECGYRTAIKSALSVHMTTH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
392
415
YQCNQCDFSTAWKSALKRHIAEKH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
421
443
YKCGECGYSTTRKSTLYQHIRTH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
449
471
YKCDQCDFSAAVKVNLVTHQATH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
477
499
YMCGECGYRATQRSTLSQHMRTH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
505
528
YKCDQCDYSASKKAYIDQHMAAKH
fgenesh2_pg.scaffold_144000110
C2H2 ZF
534
556
YMCGECGYRTAQKSHLSRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found