CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_144000111
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_144000111
T139194_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_144000111
C2H2 ZF
51
73
YRCDQCGYSAADLTNLVTHIRTH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
79
101
YKCDQCDYSAARKFSLDQHRTKH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
107
129
YMCGECGFKTTLKSNLSRHMRAH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
135
157
YKCDQCDYSAARKLYLDQHIKKH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
163
185
YMCGECGYRAAQRSTLSHHTRTH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
191
213
YKCDQCDYSAARKSHLDEHRTKH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
219
241
YMCGECGYRAATRSSLCQHMRTH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
247
270
YKCDQCDYSAAQKANLDNHIAAKH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
276
298
YMCGECGYRTVQKSKLSRHMRIH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
365
387
FMCGECGYRTVQKSSLSRHMRTH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
393
416
FKCDHCDYSATMKSNLISHVAAKH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
422
444
FMCGECGYRAARKSTLSKHMRIH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
450
473
YKCDQCDYSAAQKFLLDNHTTAKH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
479
501
YRCGECDYSSARKSTLDQHRTMH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
507
529
YMCGECGYRAARRSNLSQHMKTH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
535
558
YKCDQCDYSATEKGNLVRHVTAKH
fgenesh2_pg.scaffold_144000111
C2H2 ZF
564
586
YMCGECGYRTALKANLSRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found