CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_144000112
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_144000112
T139195_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_144000112
C2H2 ZF
46
68
HICGECGYKAPYMSDIALHMRTH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
74
96
FKCDQCDYSAARKAKLTYHLTKH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
102
124
FICGECGYRTVYKGHLFVHMRMH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
130
152
YKCDQCDFTATRKSTLVDHKMRH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
158
180
FMCEKCGYRATHRSILTVHMRTH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
186
208
FKCDQCDYSATRKYHLEMHVAKH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
214
236
FKCGECGYRAALMVHLTRHMKGH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
270
292
YMCKECGYRTTHMCYLSRHMRTH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
298
320
FKCDQCDYSATNKSTLKGHLARH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
326
348
YMCGECGYKASKSSTLARHMRTH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
354
376
YKCDQCDYSASHKSTLKNHQTTH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
382
404
YICGICGYKTVSKYDLSRHMRTH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
410
433
YKCDQCDYASKDKNHLRHHKLAKH
fgenesh2_pg.scaffold_144000112
C2H2 ZF
439
462
HVCGDCEYKTANKSSLVRHIVRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found