CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_147000083
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_147000083
T139197_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_147000083
C2H2 ZF
10
28
YKCDQCDYSTAQKGKLNSH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
34
56
YVCGHCSFRTNFKTFLSQHMRSH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
62
84
YKCDQCDYSAKRKYNLDNHLATH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
90
113
YKCGECRFRTHEKSLLSQHMEIVH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
117
139
YKCNLCDYSARRKRSLDSHLAKH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
152
174
YMCGECGFRAARKSGLSIHMRNH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
180
202
YKCDQCDYSAAQRANLISHLAKH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
208
230
YMCGECGYRTHRKGHLTHHMKVH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
236
258
YKCDQCDYSAAKKSTLDSHLVLH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
264
286
FMCGECGYRATQKSALTSHMRKH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
292
314
FKCDQCDYTAATKSALRIHMSNH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
320
342
YLCDKCGFRAYGKSQLTVHMRTH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
348
370
FKCDQCDFSTVRKGNFNSHLAKH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
377
399
FKCDQCDYSTVQKGKLNSHLAKH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
405
427
YMCGECGHRTTSKHILYVHLRTH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
433
455
YKCDQCNFSAATKLSLKYHLKHH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
468
490
YRCDQCDYSTVQKGKLNSHLAKH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
496
518
YMCGECGHRTTSKHILYVHLRTH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
524
546
YKCDQCNFSAATKLSLKYHLKHH
fgenesh2_pg.scaffold_147000083
C2H2 ZF
552
575
YMCDECGYRVSRRSHLTKHIMRLH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found