CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_151000071
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_151000071
T139205_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_151000071
C2H2 ZF
98
120
YKCDKCDFSASHKEYLKRHMFRH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
128
150
YKCDQCDYSSAQKEYLKAHMVKH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
156
178
YKCDQCDYSSTQKHYLKAHMAKH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
184
206
YKCDHCDYSTGWKNALAAHMSVH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
212
234
FVCEVCGFSSASKHRLQLHKQTH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
240
262
YKCDQCDYTASRKVYLARHKTKH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
267
289
LACSLCEYSTTDPFHLNNHMSVH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
295
317
YKCDKCDYSAVRKDHLKRHMFNH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
325
347
HKCDQCDFSAARKEHLTAHMAKH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
354
376
YKCDQCDFTTGWRSSLTTHMHVH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
382
404
YMCGECGYRTAQKQCLITHMSKH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
411
432
MCGECGYRAAEKFSLSQHMKIH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
440
462
YKCEQCDYSTAWKNNLDIHRRKH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
468
490
YMCKECGHRTVSQSDLKKHMRVH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
496
518
YRCDQCDYCTAWKGCLTRHIEEH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
524
545
YLCGECGFRTTKSNLHRHMKIH
fgenesh2_pg.scaffold_151000071
C2H2 ZF
551
573
YKCELCEYCTNRKESLARHMATH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found