CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_151000081
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_151000081
T139206_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_151000081
C2H2 ZF
14
36
YKCDQCDFSSAWKKSLTVHMAKH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
42
64
YTCGECDYKTANKYHLSRHVKIH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
70
92
YKCEQCDFRTAWKNYLDVHQSKH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
98
120
YMCGECGYRTADRSYYSQHMKIH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
126
148
HKCGKCDYRSAKRSHLNQHMKTH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
154
176
YACDLCDFCTAWKQNLDIHMAKH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
182
204
YICVECGYDTADKSNLAQHKKTH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
210
232
YKCDLCEYSAGRKADLDTHMVKH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
238
260
YVCGECGYKAGTKSHLSRHAKVH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
266
288
YKCPLCDFCTARKAHLDRHMYKH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
294
316
YMCRECGFKTADKATLSSHIKTH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
322
342
YKCDLCDFDIKSNLTKHIKIH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
348
370
YKCEQCDYRTASKSTLDTHMAKH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
376
398
YVCGECGFRTGYKSHLASHMKAH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
404
426
HQCDYCDYSSVRKRDLDAHMAKH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
432
454
YLCWQCGYRTADRSSLRKHVKIH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
460
482
HRCQLCDYSTARKGDLDRHMVQH
fgenesh2_pg.scaffold_151000081
C2H2 ZF
488
511
YMCGKCEYTTDNQSNLTKHIKMIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found