CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_151000092
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_151000092
T139208_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_151000092
C2H2 ZF
10
32
YMCGKCGFRTEYKSYLSSHMKRH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
57
79
YKCDQCDYSTARKENLDRHMAKH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
85
107
YICDECGFKTGDISVLSTHMRTH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
113
136
YKCDQCDFYTARKGDLDMHKVKHH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
141
163
YMCGECGFRTAYKYALSNHIKIH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
169
191
YRCDQCNYCTAWRQDWKKHMAIH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
197
219
YKCDQCDYCTAYKQALKTHMAKH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
225
245
YMCGKCGFRTGYKSALRSHKK
fgenesh2_pg.scaffold_151000092
C2H2 ZF
244
267
KKCDHCDFSTGTKQCLNAHVMSKH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
273
295
YMCGECGYRTAKKSGLACHMRLH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
320
342
YKCDQCDYCTARKEHWDRHMAKH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
348
370
YICDQCGFKTGDISVFSSHMRTH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
376
399
YKCDQCDYCTARKRDLDMHKVKHH
fgenesh2_pg.scaffold_151000092
C2H2 ZF
404
426
YMCGECEYRTAYKSALSKHIKIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found