CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_151000099
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_151000099
T139209_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_151000099
C2H2 ZF
15
34
DQCGYCMASKGDIERHMAKH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
40
63
YRCGKCEYTTDNQSNLTKHIKMVH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
69
91
YKCDQCDYCTARKGDLDTHIAEH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
97
119
YLCEKCGYRTSDKIQLSRHMRMH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
182
204
FKCDQCAYCTSRKSALIQHMAMH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
210
232
YMCGECGFRTRLKSALSMHMKKH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
238
260
HKCDQCDYRTARKGCLDKHMAKH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
266
288
YKCDQCDFSAAKQGQLEKHIGKH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
297
319
YMCGLCGFRTGDKSSLSSHLKKH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
325
347
HKCDQCDCSTARKGDLDTHKVEH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
407
429
YKCDQCGFCTVIKGDLEGHLVKH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
450
472
LKCDQCDFSISRKSALIQHRAKH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
478
500
YMCGECGFRTRLKSALSMHMKKH
fgenesh2_pg.scaffold_151000099
C2H2 ZF
506
528
YKCDQCDYRTVRKGDLGKHMAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found