CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_1534000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_1534000001
T139214_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
4
26
HVCPHCKYCTGNAAHLRDHIRTH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
32
55
FQCQHCDYSASQKSRLKMHVTSIH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
91
114
YRCDLCNYSTTYKAHLKRHIAAKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
123
146
YKCDICGYGTAHMSNLKRHIMSQH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
152
174
YKCGVCSYVTSRLFDLKKHTEKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
180
202
YNCEVCGYATLRMCDLKKHIAKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
208
231
YKCDICGFGSAQKSNLKQHIMTKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
237
259
YTCDVCGFGATQVSKLKRHMAKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
277
299
YKCDICGYGAAHVSTLKRHMAKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
305
327
YKCEMCGYATSRMFDLKKHIAKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
333
356
YKCDICGYCTALMSNLKRHITDKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
362
384
YRCDTCGYATSRMSDLKKHIAKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
390
412
YKCDTCDYFTAQVTNLKRHMAKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
447
470
YKCDICGYGAAQLSNLKLHIMDKH
fgenesh2_pg.scaffold_1534000001
C2H2 ZF
476
498
YNCEVCGYGTSRMCDLKKHIAIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found