CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_160000110
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_160000110
T139220_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_160000110
C2H2 ZF
39
59
TCSKCGRRFSLAHHFKRHVQT
fgenesh2_pg.scaffold_160000110
C2H2 ZF
74
96
FPCKTCGKVFSRSDWLRRHQEVH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
102
125
FRCKLCSASYKRRDALQRHELIQH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
511
535
HLCTVCKTSYKEEEDLRRHLEELHH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
540
563
QKCLYCAEFLPTRFHMNAHIRLLH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
596
618
LRCEECGAMFKSMVSLKAHLLRH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
624
647
CLCDYCGKRFNCKKELQGHVAKVH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
706
728
YTCQQCGKKYMSMLHLQRHTALH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
759
779
FACGVCGKTFRKKQNCERHEL
fgenesh2_pg.scaffold_160000110
C2H2 ZF
790
812
FTCSVCGKMTKFLSQYAKHVAQH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
819
841
HACPVCRETFPDMPAFRSHIDAH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
877
899
FLCPHCGKGFKDVAHLQVHENIH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
925
947
YSCKDCGRVFAQYSSMKRHELTH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
953
975
HQCPFCDRRFSQKCSMDRHLRQH
fgenesh2_pg.scaffold_160000110
C2H2 ZF
981
1004
YVCEICGKGFKQSTLLHNHSKKVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found