CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_160000117
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_160000117
T139222_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_160000117
C2H2 ZF
38
59
HTCSKCGRRFSLAHHFKRHVQT
fgenesh2_pg.scaffold_160000117
C2H2 ZF
80
102
FPCKTCGKVFSRSDWLRRHQEVH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
108
131
FKCKLCSASYKRRDALQRHELIQH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
499
521
FICPECHQLFHKIHLLEQHLAEH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
527
551
HLCTVCKMSYKEEEDLRRHLEELHH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
556
579
QKCLYCAEFLPTRFHMNAHIRLLH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
612
634
LRCEECGAMFKSMVSLKAHLLRH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
640
663
CLCDYCGKRFNCKKELQGHVAKVH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
722
744
YTCQQCGKKYMSMLHLQRHTALH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
749
771
HTCNVCGQKFLKEADFLRHLETH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
775
795
FACGVCGKTFRKKQNCERHEL
fgenesh2_pg.scaffold_160000117
C2H2 ZF
890
912
FTCSVCGKMTKFLSQYVKHVAQH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
919
941
HACPVCRETFPAMPAFRSHIDEH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
977
999
FLCPHCGKGFKDVAHLQVHENIH
fgenesh2_pg.scaffold_160000117
C2H2 ZF
1005
1027
YSCKDCGRVFVQYSSMKRHELTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found