CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_16000076
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_16000076
T139223_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_16000076
C2H2 ZF
10
32
YMCERCSKKFSRSQDLTNHLRTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
38
60
FKCEECGKGFAQRTAVKVHMRTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
72
94
YECGRCDREFRQASDLKCHMRTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
100
122
YLCERCSKQFCRRQDLNNHLRTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
128
150
FKCEECGKGFAQRNALKVHVRTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
156
178
YMCDECGRQFSEQGQLKGHLRTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
184
206
YMCDECGKHFGQLSNLKRHKLTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
212
234
HKCEICGKQFGQKSILNIHRQTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
240
262
FHCTLCDKQFGIMDNLKKHLKIH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
268
290
HSCDECNMRFGRLSNLKRHKMTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
296
318
YMCIICGKQFRQQGALKSHKMTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
324
346
YMCMICGKQFRQLTAMKTHKSTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
376
398
YRCEDCGRAFSLKCALTVHMRTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
404
426
FMCSQCGRQFSERGHLKGHLRTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
432
454
YKCEECGKQFSQLSNLKRHKRTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
460
482
HKCEICGKQFGQKSVLDIHRHTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
488
510
FHCNLCDKEFGHIDNLKKHMKTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
516
538
HSCDECNMRFIRLSNLKRHILTH
fgenesh2_pg.scaffold_16000076
C2H2 ZF
544
566
YVCMTCGKHFRQQGELKTHRNTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found