CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_163000033
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_163000033
T139228_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_163000033
C2H2 ZF
32
54
YKCEECSKQFSGLRNLKRHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
75
97
YSCDECNKRFSGLGDLEKHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
103
125
YKCEECSRQFRELGNLKKHIRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
131
153
YKCKECSKQFSEPGNLKRHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
159
180
YSCDECSKQFGELGSLEKHMRT
fgenesh2_pg.scaffold_163000033
C2H2 ZF
187
209
YKCEECSKEFGQLGNLKRHIKTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
215
237
YKCEECSKQFSQLGHLKSHVRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
243
265
HKCDECSKQFSQHSSLRRHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
283
300
YKCEDCDRQFSQFGYLKT
fgenesh2_pg.scaffold_163000033
C2H2 ZF
306
328
SRCEECSKQFSELCNLKNHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
371
393
HKCSYCEKEFRFKSSLNQHLRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
399
421
YQCGECGKRFIQLCNLKDHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
427
449
YECEYCNKCYSQSSHLKAHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
455
477
YRCEACYKKFSRLDILKIHMRAH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
483
505
YRCEECSKQFSKLGTLKIHMHTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
511
533
YECDYCGKRFSQQSNVDDHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
539
561
YECEYCNKRFSQAAHLKAHVRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
567
589
YRCEACCKQFSRLGILKNHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
595
617
YRCEACSKQFTKLSSLKNHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
623
645
YTCEECNKQFSDPTHFKRHIRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
651
673
YRCEKCSKQFSQLTNLKRHIRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
679
701
YKCEECSKQFIQLSNLKSHMRTH
fgenesh2_pg.scaffold_163000033
C2H2 ZF
707
729
YTCEKCNKSYRHSRSLCAHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found