CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_167000094
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_167000094
T139232_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_167000094
C2H2 ZF
296
315
TCECGLSTYYLDNLRRHLRK
fgenesh2_pg.scaffold_167000094
C2H2 ZF
348
370
FECSRCSFWSATRSELVKHQKTH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
374
396
HFCSECPFQTNHTAKLRRHMQMH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
506
528
FECAHCPYRTAHAKSLDRHQRNH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
534
556
FQCHLCSFSAKGQSALSAHMNVH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
656
678
YRCDQCDFRSRHSVSLKEHLFIH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
684
709
YVCTKDPKCPFVSAHQGNMRSHMKSH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
715
737
FKCRFCTFSTVRQSVLTKHQRLH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
836
858
FNCSTCSYTTDKKHLLLVHQAKH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
864
886
FHCDECDFSTLTVENLIQHLRTH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
894
916
YKCDECPYIAERQRALINHKNNH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
922
944
FKCKYCSYTATRGYYIRVHMLLH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1026
1048
IYCEYCDHSTTRPRDMKVHVRLH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1054
1076
YACPDCPFRAIQSHHLQKHQKYH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1082
1104
QKCRLCTFSCRSASLLRSHVQLH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1276
1298
ICCDQCDYTTSNESLFKHHWQTH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1304
1326
FKCDLCPYRGTGRANLLQHQSFH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1495
1517
FKCNQCSYATDEKYRLLKHKAMH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1523
1545
FKCDQCDYTTDNSHRLMIHTTRH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1551
1573
HMCPLCPFETMSKTDLKVHKQKH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1579
1601
QKCKYCTYSCENKKHLSKHLKLH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1752
1774
YSCDQCDLKTPDKEALLSHMKEH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1780
1803
FRCSVCPYSTVIESYYVLHQRRHH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
1808
1830
LSCKYCSYSAGKKKDIEQHTRMH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
2146
2169
YQCSQCYYSTNNEGFLQVHMSSRH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
2175
2198
FHCSKCDFSTERPKYLKEHIYKQH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
2827
2849
YSCRLCGRTFEEWRTYQQHARQH
fgenesh2_pg.scaffold_167000094
C2H2 ZF
2875
2897
FTCKLCGRRFTGQVDWIQHMQHH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found