CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_168000065
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_168000065
T139233_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_168000065
C2H2 ZF
19
41
YTCAVCGYRTAVRSYLLRHMRTH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
47
69
YKCDQCDYSAAEKSTLNYHQTRH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
75
97
YMCGECGYRTAAKSGLSKHMRTH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
104
117
KCDQSNFSNHMRTH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
123
146
YKCDQCDYSARTVRSYLLRHMRTH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
152
174
YKCDQCDYSAAEKSTLNYHQTRH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
180
202
YMCGECGYRTAAKSGLSKHMRTH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
232
254
YHCDKCDYTAARKSNLDKHQAKH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
260
282
FVCKKCAYKTAYRSNFSNHMRTH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
288
311
YKCDQCDYSARSKSALGYHARTKH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
317
339
YMCGECGYTTAQKCTLSNHMRTH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
397
419
FMCGECGYRTVHKSHLSRHMRTH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
425
447
YKCHQCDYSAVQKSGLDHHLAKH
fgenesh2_pg.scaffold_168000065
C2H2 ZF
452
472
PYLCGYRAAHRSSLSMHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found