CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_1692000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_1692000001
T139235_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_1692000001
C2H2 ZF
10
32
FSCKSCDFKTAHKNSLRTHMKTH
fgenesh2_pg.scaffold_1692000001
C2H2 ZF
38
62
YMCEVCGHRSALAGALRIHILTLHH
fgenesh2_pg.scaffold_1692000001
C2H2 ZF
66
88
IKCRICGYVIKQASHLESHMKTH
fgenesh2_pg.scaffold_1692000001
C2H2 ZF
122
144
FACDQCTYKSHNKYSLITHMKTH
fgenesh2_pg.scaffold_1692000001
C2H2 ZF
150
173
HACDQCDYRSVSSSGLFKHKRKNH
fgenesh2_pg.scaffold_1692000001
C2H2 ZF
178
200
WQCDVCGRQCCSEALLERHKERH
fgenesh2_pg.scaffold_1692000001
C2H2 ZF
209
231
YVCKECKYRTFDFKTLKEHMRVH
fgenesh2_pg.scaffold_1692000001
C2H2 ZF
236
252
PYACDKASHLQAHMKTH
fgenesh2_pg.scaffold_1692000001
C2H2 ZF
256
280
HRCDFEGCNFTTTMQQKLQDHQKVH
fgenesh2_pg.scaffold_1692000001
C2H2 ZF
286
308
FACDQCTFQSHNKYSLIDHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found