CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_17000189
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_17000189
T139236_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_17000189
C2H2 ZF
154
175
TCAICSKHFQNSYYLHKHELSH
fgenesh2_pg.scaffold_17000189
C2H2 ZF
181
203
VECNKCNKFFRRPSDLRAHQRSH
fgenesh2_pg.scaffold_17000189
C2H2 ZF
209
231
FSCEVCGKSFKQQQVLRAHLKTH
fgenesh2_pg.scaffold_17000189
C2H2 ZF
237
259
FKCSRCGDEFKTKGSLKRHERRH
fgenesh2_pg.scaffold_17000189
C2H2 ZF
265
286
YKCNKCGRGFSESGALLRHHKA
fgenesh2_pg.scaffold_17000189
C2H2 ZF
426
448
QCRVCKVVLTNSHNLKLHLLAAH
fgenesh2_pg.scaffold_17000189
C2H2 ZF
454
477
FRCGLCAFCTGERSDLQKHMLMKH
fgenesh2_pg.scaffold_17000189
C2H2 ZF
584
606
FKCSMCDGHFVSRDSLKRHIVSH
fgenesh2_pg.scaffold_17000189
C2H2 ZF
612
634
YKCGECGKLYKRISHVKEHLRVH
fgenesh2_pg.scaffold_17000189
C2H2 ZF
640
654
FQCPHCKKHYKTQVM
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found