CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_177000069
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_177000069
T139244_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_177000069
C2H2 ZF
564
586
YYCSECSRSFTRQHTFNSHMASH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
596
620
HKCDHQGCNKTFRVKSHLEEHMVLH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
739
761
QQCPHCPLRFTHKGTLSKHLSVH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
772
796
HKCTQDGCTREFPTPSKLRDHLLSH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
804
827
FQCETCGKFFPRKGQLKKHIMYTH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
832
855
HDCKQCDKKFHTDAKLARHVSIAH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
891
913
YKCEECDKEFLVKAYFKQHIRTH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
920
942
HICTTCDMGFTSGFLLRRHEVRH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
948
971
FKCKFCEKTYKHRGAVEHHQKKEH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
987
1010
FACNVCGRTGHTKQVIEKHIKAVH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
1017
1041
ACPYKGCNKAFVDQNALRSHVATIH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
1048
1070
FKCDKCDRSFYRKKQLDWHIFSH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
1077
1100
HQCDSCGKKFVCARTLREHINAIH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
1106
1128
YSCSFCSKSFSKQHALEDHQRIH
fgenesh2_pg.scaffold_177000069
C2H2 ZF
1161
1183
HACPQCNLSFMSTLALERHQKRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found