CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_183000067
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_183000067
T139254_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_183000067
C2H2 ZF
10
32
YKCDQCDYSAARKSSLDQHQAKH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
38
60
YMCGECGYRTAQKSHLSRHMKTH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
66
88
YKCDQCDYSAAQKSHLDRHLAKH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
94
116
YMCGECGYRTAHKSDLSTHMRIH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
122
144
YRCDQCDYSATRKCHLDQHLAIH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
150
172
YMCGECEYRTAWESQLSRHMRTH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
178
200
FKCGQCDYSTSRKDTLDQHLAKH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
206
228
YMCGECGYRTARKSTLSKHMRTH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
234
256
YKCDQCDYSASRKDSLDQHLAIH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
262
284
YMCGECGYRTARKSDLSQHMRTH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
290
312
YKCDQCDYSAAHKSSLDQHQAKH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
318
340
YMCGECGYSTVQKSHLSQHMRIH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
346
368
YKCDQCDYSAVHKNSLAQHVAKH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
374
396
YKCDRCDYSAALKSALNKHLAKH
fgenesh2_pg.scaffold_183000067
C2H2 ZF
402
424
YMCGECGYRTTQKSNLANHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found