CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_183000069
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_183000069
T139255_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_183000069
C2H2 ZF
55
77
YMCGECAYRTAKKSHLAEHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
111
133
YMCGECGYRTARKPDLMKHMRSH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
139
161
YKCDQCDYSTARKSTLCQHKASH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
167
189
YMCGECGYRTVYKSYLSQHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
195
217
YKCDQCDYSAAHKSNLDKHLSKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
223
245
YMCGECGYMTARRSDLSRHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
251
273
YKCDQCDYSAAHKVSLVNHQAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
608
630
YMCGKCGYRTAWESHLSQHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
636
658
FKCDQCDYSAAQKYSLDLHLIKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
682
704
YMCGECGYRTAQKYALSQHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
710
732
YKCDQCDYSAAVKSTLDLHLAIH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
738
760
YMCGECGYRTAKKYALAMHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
766
788
YKCDQCDYSAAVKSTLDLHLAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
816
838
YMCGECKYRTAQKYALSMHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
844
866
YKCDQCDYSAAVKSTLDLHLARH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
963
985
YRCEECGFRTAYRSALSKHMKTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
991
1013
YMCGECGYRAARKSTLSQHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1019
1041
YKCNQCDYSTARKFSLDQHQAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1047
1069
YMCGECGYRAARKSQLSEHTRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1075
1097
YKCDQCDYSAAQKSNLNQHLAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1103
1125
YMCGECGYRTARKSHLVEHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1159
1181
YMCGECGYRTVLKSDLSIHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1187
1209
YKCDKCDYSAATKSTLDKHLAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1215
1237
YMCGECGYRTARKSDLSIHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1309
1331
YMCGECGYRAAYKSYLSRHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1337
1359
YKCDQCDYSAARMSTLNQHLAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1365
1387
YMCGECGYRAAKKSHLTEHIRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1393
1415
YKCDQCDYSATRKYHLDQHLAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1861
1882
YMCGCGYRTAYTSNLSKHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1888
1910
YKCDQCDYSAARKSHLDYHLAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1916
1938
YMCGECGYRTTQKCNLSIHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1944
1966
YKCDQCDYSAAQKSSLDNHLAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
1972
1994
YMCGECGYRTALKSNLSIHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2000
2022
YKCDQCDFSAAQRSTLNQHLARH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2028
2050
YMCGECGYRTAQRSNLTGHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2056
2078
YKCDQCDFSAARKYSLDQHLAVH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2148
2170
YMCGQCGYRAAKKSHLAEHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2204
2226
YMCGECGYRTARKPDLMKHMRSH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2232
2254
YKCDQCDYSAARKSTLCQHKASH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2260
2282
YMCGQCGYRAVYKSYLSQHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2288
2310
YKCDQCDYSAAHKSNLDKHLAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2316
2338
YMCGECGYRTARRSDLSRHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2418
2440
YMCGECGYRTAWKANLSRHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2474
2496
YMCGECGYRTAHKSHLFRHMRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2502
2524
YKCDQCDFSAAEKSTLNQHLAMH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2530
2552
YMCGECGYRTAKKSHLAEHIRTH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2558
2580
YKCDQCDYSATRKYHLDQHLAKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2586
2608
YMCGECGYRTAQKPNLSQHMRKH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2614
2636
YKCDQCDYSAAQASTLNNHLAMH
fgenesh2_pg.scaffold_183000069
C2H2 ZF
2642
2664
YMCGECGYRVTQKSHLSKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found