CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_183000072
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_183000072
T139258_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_183000072
C2H2 ZF
78
100
YMCGECGYRTDRKSNLSKHMRTH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
106
128
YKCDQCDYSASKKCNLDYHLAKH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
134
156
YMCGECGYRATLKSTSSRHMRTH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
162
184
YKCDQCNYSAALKSSLNQHLAKH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
190
212
HMCGECGYRTTWKSDLSVHMRTH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
218
239
YKCDQCDYSTARQSTLKQHVAW
fgenesh2_pg.scaffold_183000072
C2H2 ZF
246
268
YMCGECGYRTAHKSHLSRHMRTH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
274
296
YKCDQCDYSAAVKSNLKQHLAKH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
392
414
YVCGECGYRTAWGSHLSIHMRTH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
420
442
FKCDQCDYSAAQKNNLDSHLAKH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
448
470
YMCGECGYRTALKSNLSKHMRIH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
476
498
YKCDQCDYSASTKSHLDYHLAKH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
504
526
YMCGECGYRATLKSTLSRHMRTH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
532
554
YKCDQCNYSAARKSSLNQHLAKH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
560
582
YRCGECEYKTTWKTDLAKHMRTH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
588
610
YKCDQCDYSAAVKSSLDRHLAKH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
616
638
YMCGECGYRTTQKSNLVKHMRTH
fgenesh2_pg.scaffold_183000072
C2H2 ZF
644
666
YKCNQCDYSAAQKSTLKKHCKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found