CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_183000075
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_183000075
T139261_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_183000075
C2H2 ZF
469
491
HKCDQCDYSAAQKSNLDSHLAKH
fgenesh2_pg.scaffold_183000075
C2H2 ZF
497
519
FMCGECGYRTAKKSHLSIHMRTH
fgenesh2_pg.scaffold_183000075
C2H2 ZF
525
547
YKCEQCDYSAARKGSLDQHLAKH
fgenesh2_pg.scaffold_183000075
C2H2 ZF
553
575
YMCGECEYRTVLKSDLSRHMRTH
fgenesh2_pg.scaffold_183000075
C2H2 ZF
581
603
YKCDHCDYSAAQKSHLDSHLANH
fgenesh2_pg.scaffold_183000075
C2H2 ZF
609
631
YMCGECGYRTAIKSYISQHMRTH
fgenesh2_pg.scaffold_183000075
C2H2 ZF
637
659
YKCDQCDYSAARKDSLDQHLAKH
fgenesh2_pg.scaffold_183000075
C2H2 ZF
665
687
YMCGECGYRTALKSDLSRHIRTH
fgenesh2_pg.scaffold_183000075
C2H2 ZF
693
715
YKCDQCDYSAAQKSHLDSHLAKH
fgenesh2_pg.scaffold_183000075
C2H2 ZF
721
743
YMCGECGYRTAYKSALSRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found