CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_183000076
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_183000076
T139262_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_183000076
C2H2 ZF
57
79
YMCGECGYRAARKSLLSEHTRTH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
85
107
YKCDQCDYSAARKSNLNQHLAMH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
130
152
YKCDQCDYSATRKYHLDQHQAIH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
158
180
YMCGECGYRTAQKSTLSYHMRTH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
186
208
YKCDQCDYSAAAKSTLDRHLAKH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
214
236
YLCGECGYRTARKSTLSIHLRTH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
242
264
FKCDQCDYSAAMKSTFDRHLAKH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
270
292
YMCGECGYRATQKSHLSKHMRTH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
298
320
YKCNQCDYSAAQKSSLYQHQAKH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
326
348
YMCGECGYRTAHTSHLSRHMRTH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
354
376
YKCEQCDYSATTKGSLEYHLAQH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
382
404
YMCGECGYRAAQKSDLVKHMRTH
fgenesh2_pg.scaffold_183000076
C2H2 ZF
410
432
YKCDQCDYSATKKSTLNNHCKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found