CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_183000090
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_183000090
T139265_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_183000090
C2H2 ZF
1
22
MCRVCGYRAACESHLSQHMRTH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
28
50
FKCFQCNYSTAQFSNLNQHLAKH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
56
78
FMCGECCYRTSWKSALSQHMRTH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
84
106
FKCDQCDYSAAQKYSLDQHIARH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
112
134
YMCGECGYRATQKSHLSVHMRTH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
140
162
LKCDQCDFSAAYKSMFNRHQAIH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
168
190
HMCGECGYRTAQKSKLSIHMRTH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
224
246
HMCGECGYRTAQKYALSMHMRTH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
252
274
YKCDQCDYSAAQKSTLDRHLAKH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
303
325
YMCRECGFRTARKSTLSEHMRTH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
331
353
YKCDQCDFSTAYKSNLKKHLAIH
fgenesh2_pg.scaffold_183000090
C2H2 ZF
359
381
YMCGECGYRTARKSQLSQHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found