CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_183000096
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_183000096
T139269_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_183000096
C2H2 ZF
83
104
YMCGCGYRTAYTSNLSKHMRTH
fgenesh2_pg.scaffold_183000096
C2H2 ZF
110
132
YKCDQCDYSAARKSHLDYHLAKH
fgenesh2_pg.scaffold_183000096
C2H2 ZF
138
160
YMCGECGYRTTQKCNLSIHMRTH
fgenesh2_pg.scaffold_183000096
C2H2 ZF
166
188
YKCDQCDYSAAQKSSLDNHLAKH
fgenesh2_pg.scaffold_183000096
C2H2 ZF
194
216
YMCGECGYRTALKSNLSIHMRTH
fgenesh2_pg.scaffold_183000096
C2H2 ZF
333
355
YNCDQCDYSAARKSSLDQHQAKH
fgenesh2_pg.scaffold_183000096
C2H2 ZF
361
383
YMCRECGYRTAYKSHLAEHIRTH
fgenesh2_pg.scaffold_183000096
C2H2 ZF
389
411
HKCDQCDFSTARKYSLDQHVAKH
fgenesh2_pg.scaffold_183000096
C2H2 ZF
417
439
YMCGECGYRTAQKYALFMHMRTH
fgenesh2_pg.scaffold_183000096
C2H2 ZF
445
467
YKCDQCDYSAARKSTLDQHLAKH
fgenesh2_pg.scaffold_183000096
C2H2 ZF
473
495
YMCGECGYRTAKKSHLFEHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found