CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_184000051
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_184000051
T139277_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_184000051
C2H2 ZF
30
52
YRCEECSSQFGQLSHLKTHMRTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
58
80
YRCEECSRQFSQLGHLTDHMRTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
86
108
YRCEECSKQFSQLGNLKRHMRSH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
114
136
YNCEECSKQYNTLDNLKTHMRTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
142
164
FKCDECGKQFSLLGNQKKHMRTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
170
192
YKCEVCSRQFSHLGHLKDHMRTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
198
220
YRCEECSMQFSHLNVLKTHMRTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
226
248
YKCEECSMQFSHLNALKDHVRTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
254
276
YKCEECSRQFSQLGTLKRHMRSH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
287
309
YMCGECGYRTARKCHLSQHMRTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
315
337
YKCDQCDYSAAQKSHLDYHLAKH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
343
365
YMCGECGYRTSLESDISRHMKTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
371
393
FKCDHCDYSSARKYSLDKHLAMH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
399
421
YKCEECGYRTTRKYHLSRHLRTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
427
449
FKCDQCDYSTAHKQCLDRHLAIH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
455
477
YMCGECGYRSTWKSHLSRHMRTH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
483
505
YKCDQCDYSAAQKSSLDQHVAMH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
511
533
YMCGECEYRTTHKSNFSQHVRKH
fgenesh2_pg.scaffold_184000051
C2H2 ZF
539
561
YKCDQCDYSAAQKSSLDKHLLIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found