CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_187000088
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_187000088
T139288_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_187000088
C2H2 ZF
18
41
YICGHCGYSTANKQHLVHHVRATH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
47
70
FQCAVCDYSAARKITLERHILAKH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
76
98
YKCTQCDHSAVTKNNLKVHMRSH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
104
126
YSCEMCDFSSAHKNSLRKHMATH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
132
154
YNCELCDYSTAHMSSLKVHMVTH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
160
182
YKCEMCDYSAANSSNLKVHSATH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
188
210
YKCEICDYSTTHMSNLKVHIVTH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
229
251
YKCEMCDYSAAHVSILKRHMATH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
257
279
YKCEVCDYSTARMSYLKRHMVTH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
285
307
YKCGICSYSAAHVSILKRHMATH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
313
335
YKCEVCDYSAAHKSNLKRHMATH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
341
363
YKCDVCDYSAAQVSHLRYHMATH
fgenesh2_pg.scaffold_187000088
C2H2 ZF
369
391
YECGVCDFSAARMFTLKRHMATH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found