CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_187000097
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_187000097
T139289_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_187000097
C2H2 ZF
10
32
YKCDQCDYSAARKSHLNQHLAKH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
38
60
YMCGECGHRSAQKSDLFKHLRTH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
75
97
YKCNQCDYSAAAKFNLDKHLSKH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
103
125
YMCGECGHRTARKSTLSKHMKTH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
131
153
YKCDQCDYSTARKDSLDQHLAKH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
159
181
YMCGECGYRTARKSDLSQHIRTH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
187
209
YKCDQCDYSAAHKSTLKQHLAKH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
215
237
YMCGECGYSTVQKCHLSQHMRIH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
243
265
YKCDQCDYCAAQKSNLDRHLSKH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
297
319
FMCGECGHRTARKSDLSRHVRTH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
325
347
YMCGECGHRTARKSDLSRHVRTH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
353
375
FKCNQCDYSAAAKFNLDKHLSKH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
381
403
YMCGECGNRTAGKGDLSKHMRIH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
409
430
YKCDQCDYSAAQKSTLDQHVAK
fgenesh2_pg.scaffold_187000097
C2H2 ZF
437
459
YMCGECGLRTVDRGHLSRHMKTH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
465
487
YKCDQCDYSAVLKTNLDRHLTTH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
493
515
YMCDKCGYRAAQRSSLSQHMRTH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
521
543
YKCDQCDYSAAQKATLHQHMSKH
fgenesh2_pg.scaffold_187000097
C2H2 ZF
549
571
YMCGQCRYRTALKGDLSKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found