CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_187000099
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_187000099
T139291_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_187000099
C2H2 ZF
10
32
YKCDQCDYSTAQKHHLDQHRTKH
fgenesh2_pg.scaffold_187000099
C2H2 ZF
38
60
YMCGECGHRAARKGDLSKHMRTH
fgenesh2_pg.scaffold_187000099
C2H2 ZF
89
110
YKCDQCDYSATQKSHLEQHVAK
fgenesh2_pg.scaffold_187000099
C2H2 ZF
117
139
YMCGECGHRTAHKSNLTQHMRTH
fgenesh2_pg.scaffold_187000099
C2H2 ZF
145
167
YKCNQCDYSAAVKSTLDKHLTKH
fgenesh2_pg.scaffold_187000099
C2H2 ZF
173
195
YMCGECGYRTGDKRNLSRHMKTH
fgenesh2_pg.scaffold_187000099
C2H2 ZF
201
223
YKCDQCDYSAAQKSNLDQHVAKH
fgenesh2_pg.scaffold_187000099
C2H2 ZF
229
251
YMCGECGYRTARRDNLSLHMRTH
fgenesh2_pg.scaffold_187000099
C2H2 ZF
257
279
YKCDHCDYSAAQKCHLNEHLAKH
fgenesh2_pg.scaffold_187000099
C2H2 ZF
285
307
FMCGECGYRTAFRGSLSRHMRTH
fgenesh2_pg.scaffold_187000099
C2H2 ZF
313
335
YKCDQCDYSAALKSTLKGHLATH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found