CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_190000100
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_190000100
T139292_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_190000100
C2H2 ZF
10
32
YMCGDCGYRAAYRSSLFLHMSTH
fgenesh2_pg.scaffold_190000100
C2H2 ZF
41
63
YMCRDCDYRTAHKSALSQHMRTH
fgenesh2_pg.scaffold_190000100
C2H2 ZF
69
91
YKCDQCDYSATQKNNLKRHRAKH
fgenesh2_pg.scaffold_190000100
C2H2 ZF
97
119
YKCDQCDYSAARKDTLDRHMASH
fgenesh2_pg.scaffold_190000100
C2H2 ZF
147
169
YVCEECSYRASGRTDLTNHMRKH
fgenesh2_pg.scaffold_190000100
C2H2 ZF
204
226
YMCEKCGHRTANKSTLDQHMVRH
fgenesh2_pg.scaffold_190000100
C2H2 ZF
232
254
YMCGECGFKTAHKFSLSLHIKTH
fgenesh2_pg.scaffold_190000100
C2H2 ZF
260
282
YKCDQCDCSYTVKGHLDRHMAKH
fgenesh2_pg.scaffold_190000100
C2H2 ZF
288
310
YMCEECGYRTADRSCLSKHLKTH
fgenesh2_pg.scaffold_190000100
C2H2 ZF
316
338
YKCDKCEYSSAIKSTLARHMVMH
fgenesh2_pg.scaffold_190000100
C2H2 ZF
344
366
YKCEECGYRAATKYRLSQHIKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found