CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_19000143
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_19000143
T139294_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_19000143
C2H2 ZF
334
355
VCKCKEKFTSKTSYNQHRLEAH
fgenesh2_pg.scaffold_19000143
C2H2 ZF
357
379
LTCEYCEENFRSRQLLNKHLKTH
fgenesh2_pg.scaffold_19000143
C2H2 ZF
421
446
YECIVNNCKSTFRNRAAVQNHIATVH
fgenesh2_pg.scaffold_19000143
C2H2 ZF
451
475
FPCPHEGCKQTFGEKSRLKSHYKVH
fgenesh2_pg.scaffold_19000143
C2H2 ZF
481
503
HQCSYCGKMFRRSEHLKVHMRIH
fgenesh2_pg.scaffold_19000143
C2H2 ZF
509
532
FNCGLCNYSGRQYNSLRWHMKTHH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found