CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_193000045
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_193000045
T139299_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_193000045
C2H2 ZF
182
205
FSCSQCSKQFKIRKRFETHMKKVH
fgenesh2_pg.scaffold_193000045
C2H2 ZF
248
269
FTCEVCQKVFEKRKTFTNHRRT
fgenesh2_pg.scaffold_193000045
C2H2 ZF
277
300
HPCQSCSKVFERSDSLKYHTQKYH
fgenesh2_pg.scaffold_193000045
C2H2 ZF
307
329
HQCEVCGKQFYKKDKLRLHQAVH
fgenesh2_pg.scaffold_193000045
C2H2 ZF
341
363
FKCDTCNNRYCSRAELEIHKRTH
fgenesh2_pg.scaffold_193000045
C2H2 ZF
369
392
CLCEHCGKCFTSKRDAKKHILRIH
fgenesh2_pg.scaffold_193000045
C2H2 ZF
402
425
HFCSVCHKSFLEKSNMLKHVNAVH
fgenesh2_pg.scaffold_193000045
C2H2 ZF
431
453
FPCDQCQYRGKNKRDLQRHQNRH
fgenesh2_pg.scaffold_193000045
C2H2 ZF
459
482
FSCLICNKSYNSSEALNYHKRAHH
fgenesh2_pg.scaffold_193000045
C2H2 ZF
488
510
YKCTDCATEFHVREAYNHHMKSH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found