CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_199000073
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_199000073
T139302_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_199000073
C2H2 ZF
12
33
KCPLCKFTTADQQQLESHMFTH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
39
61
IVCDKCGYRALNHRAMTKHMRTH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
77
99
LKCPLCKFAATNRKEFESHMFTH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
138
160
HSCHLCKYTTTDQKELESHRAVH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
168
190
FMCGECRYRTDSMYSLQMHMNTH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
296
317
KCPLCEFITTEQHQLESHMFTH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
330
352
IICEKCGYRTLNFMSMAKHMRTH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
371
393
SKCPLCKFTTINQRQLELHMFTH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
397
419
FVCEHCGFMAQGRRTMRKHMKTH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
437
459
YSCHLCEFATTDQKEFESHGIIH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
467
489
FMCGECRYRTDTMYSLQMHMKTH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
713
735
LKCGECDYTTFVEHALFKHIAGH
fgenesh2_pg.scaffold_199000073
C2H2 ZF
771
793
FVCGKCGYNAGSKHRLAKHMKIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found