CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_199000074
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_199000074
T139303_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_199000074
C2H2 ZF
12
33
KCPLCKFTTADQQQLESHMFTH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
39
61
IVCEKCGYRALNHRAMTKHMRTH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
80
102
LCCPLCNFTTTYQKQLESHMFTH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
106
128
FVCELCGIRAPCESTMEIHMKTH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
150
171
GCSLCEFTTTDGEELESHRAIH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
346
368
FKCEECDFSTYVEHGLRKHMVCH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
372
394
FMCGVCGHRASSKHQVDAHMRTH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
400
422
FMCEKCGYNAADKRRLAKHMKIH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
427
449
FACEKCEYTTTLPGDFNQHLRTH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
455
477
LKCEECGFKTSQKGALVRHVRIH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
488
510
YPCPECGYRTTNKTDLDSHLKTH
fgenesh2_pg.scaffold_199000074
C2H2 ZF
517
539
FMCGLCGLKIPNKGAMARHMKIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found