CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_199000079
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_199000079
T139306_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_199000079
C2H2 ZF
10
32
YMCGECGHRTDRKSAMDNHMKVH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
38
60
FACEKCEYRAGSKGDLKRHMKTH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
66
88
YMCGECGHRTDRKSAMDNHMRVH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
94
116
FACEDCDFSTSLRGDLTRHIKTH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
122
144
FACENCEYRTTRKSHLQRHIKTH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
150
172
FSCEKCDFRTCRKKTLSQHLKTH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
206
228
FMCGECGHRTDRKSAMDNHMKVH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
234
256
FMCKECGFLAANKSKMFDHMSTH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
258
280
YNCGECSYRTPFKASLERHVQTH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
331
353
YMCEKCGFLTPFHSTMNGHMKKH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
359
381
IKCELCDFRTVSKWRLKPHMLTH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
387
409
FKCGKCDFKTARKEHLKRHTETH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
417
439
FQCEHCDYKAAEKCKLERHMTTH
fgenesh2_pg.scaffold_199000079
C2H2 ZF
445
467
YPCDKCDYRAAQKGTLKQHLETH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found