CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_2000289
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_2000289
T139313_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_2000289
C2H2 ZF
66
88
HSCPHCDHETVDKTSMTIHIRTH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
94
117
FRCKQCDYSAAQKGALKRHVMAVH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
123
145
YHCGYCDYSAVQKIALEKHMAKH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
160
182
HTCPHCEFETISTTSLANHIRTH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
188
211
FKCPQCDYSAAQKAQLKRHIQCKH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
217
240
YHCGHCDFSAARKGGLFVHVRTMH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
246
269
YKCTFCDYSAKQSGHLKEHIMSKH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
275
297
HKCTQCDFSSVSKKSLKLHMTTH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
303
325
YSCEFCSYASRQKGQLKIHMTEH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
331
353
FKCKVCDYCSASKSRLKTHMVSH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
359
381
YKCKMCDYSAISMSRVERHMAIH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
387
409
FHCEQCDFSTARKEDLKRHVAKH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
415
437
HKCELCDYSSWQSHHLKRHMITH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
443
465
YKCEICGYAASQRCSLKAHMTKH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
471
493
FQCEECDFSTATKAHLANHMTRH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
499
521
YMCEVCGYAAAVKGGLRQHMAIH
fgenesh2_pg.scaffold_2000289
C2H2 ZF
527
549
YKCDQCDYTAAQKGHLNIHLANH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found