CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_2088000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_2088000002
T139319_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
29
51
YRCEECSKQFSRLDHLKSHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
57
79
YRCEECSRQFSRLDHLKTHMQTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
85
107
YRCEECSRQFSRLCDLKTHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
113
135
YKCEECSRQFSGLGALKAHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
141
163
YICEECSKQFSQLNNLKTHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
169
191
YKCEECSKHFSQICALKRHISTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
197
219
YRCEECSRQFSRLFILKNHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
225
247
YKCDECSKQFSRLGHLKAHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
253
275
YKCEECSWQFSDPRNLKKHMQTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
281
303
YRCEECSRQFSTQGNLNTHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
309
331
YRCEECSKPFSRIHHLKTHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
337
359
YRCEDCSKQFSALGALKTHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
365
387
YNCEECSKHFSRLGDLKSHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
393
415
YRCEECSKQFSELCNLKTHMRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
421
443
YRCEECSRQFSERSTLKKHIRTH
fgenesh2_pg.scaffold_2088000002
C2H2 ZF
449
471
YRCEECSRQFSELGSLKKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found